BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030C06SP1|AL429189
(962 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig930 1659 0.0
>3x_Contig930
Length = 2203
Score = 1659 bits (817), Expect = 0.0
Identities = 872/913 (95%)
Strand = Plus / Minus
Query: 39 ttatccttttattcggatsaacttggaagakatgataaagtgcagcagtgctgtaccggg 98
|||||||||||||||||| |||||||| || |||||||||||||||||| |||||||||
Sbjct: 2203 ttatccttttattcggatcaacttggaggatatgataaagtgcagcagttctgtaccggt 2144
Query: 99 tcatacctggrgasacatgtktcatttcgtcaaakacataatattgtccatgtttttcca 158
|||||||||| || |||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 2143 tcatacctggagacacatgtttcatttcgtcaaatacataatattgtccatgtttttcca 2084
Query: 159 tatcctcgaggratgcgtgatatackgaatccttgcctttgatagcrattttccataaat 218
||||||||||| |||||| |||||| |||||||||||||||||||| |||||||||||||
Sbjct: 2083 tatcctcgaggaatgcgtcatatactgaatccttgcctttgatagcaattttccataaat 2024
Query: 219 ratggsctaaraccataacacagtagataataccacagckccagcaatcaactagtcttg 278
|||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2023 aatggcctaaaaccataacacagtagataataccacagctccagcaatcaactagtcttg 1964
Query: 279 grtcgkattgttgttttggaataaactcctcaggsgcaacataaggstcagatcctgckg 338
| ||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
Sbjct: 1963 gatcgtattgttgttttggaataaactcctcaggcgcaacataaggctcagatcctgctg 1904
Query: 339 gkccggkttggraatgtgctttcttttcccaggstgtttggracacagaacttgtaccaa 398
| |||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 1903 gtccggtttggaaatgtgctttcttttcccaggctgtttggaacacagaacttgtaccaa 1844
Query: 399 aatcacatatttttratacacctgtrgggagaaatagcaagtkttctggkttaatatcac 458
|||||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||
Sbjct: 1843 aatcacatatttttaatacacctgtagggagaaatagcaagttttctggtttaatatcac 1784
Query: 459 aatgagckacaccgtgagcgtgcatgtgttgaataccatgtagtagtkgtttcatgaagc 518
||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 1783 aatgagctacaccgtgagcatgcatgtattgaataccatgtagtagttgtttcatgaagc 1724
Query: 519 aatctgcttctaatggatgkgaaastgaatcagattttgagcttcttgtaatcaagctgt 578
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 1723 aatctgcttctaatggatgtaaaactgaatcagattttgagcttcttgtaatcaagctgt 1664
Query: 579 atagatcacctgaagggcaaaaktccattacttcataaaakgcgttaggtgtttgcatta 638
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 1663 atagatcacctgaagggcaaaattccattacttcataaaatgcgttaggtgtttgcatta 1604
Query: 639 aatcaataacgtttaaaatgttaggatgtgttcttgccgaagatcttctgcttttgttac 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 aatcaataacgtttaaaatgttaggatgtgttcttgccgaagatcttctgcttttgttac 1544
Query: 699 caccactcaacgataatcctatcacaaattctgaggttagtcttgtgctaaacttctttg 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 caccactcaacgataatcctatcacaaattctgaggttagtcttgtgctaaacttctttg 1484
Query: 759 gaggctcatcaggtcttggcttcagttcttttaccgcatagaataacttgttatcatgga 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 gaggctcatcaggtcttggcttcagttcttttaccgcatagaataacttgttatcatgga 1424
Query: 819 aatatgtattatctttcagatcaggttcatctgggkcaataaatttatagcatagtttta 878
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1423 aatatgtattatctttcagatcaggttcatctgggtcaataaatttatagcatagtttta 1364
Query: 879 caaccccataggcaccttgtccaatgataccgatcgacttcccgtatttctcacataaat 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 caaccccataggcaccttgtccaatgataccgatcgacttcccgtatttctcacataaat 1304
Query: 939 gctgctttcgtgg 951
|||||||||||||
Sbjct: 1303 gctgctttcgtgg 1291
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4751
Number of Sequences: 1807
Number of extensions: 4751
Number of successful extensions: 99
Number of sequences better than 1.0e-20: 1
length of query: 962
length of database: 10,358,551
effective HSP length: 16
effective length of query: 946
effective length of database: 10,329,639
effective search space: 9771838494
effective search space used: 9771838494
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.9 bits)
S2: 49 (100.0 bits)